Michiel Vermeulen performed his doctoral work in the laboratory of Henk Stunnenberg at the University of Nijmegen in the Netherlands. In 2005 he joined the lab of Matthias Mann in Munich, Germany as a post-doctoral fellow. In 2009 he was appointed as assistant professor and in 2013 as associate professor at the University Medical Center Utrecht in The Netherlands. In February 2014 he was appointed as full professor at the Radboud University in Nijmegen, The Netherlands. Since February 2023 he also holds a part-time position as senior group leader at the Dutch Cancer Institute. The group currently consists of 8 PhD students, 5 post-docs and 3 technicians. Awarded grants include NWO-VIDI (2009), an ERC Starting Grant (2012), an ERC Consolidator Grant (2017) and an NWO-VICI (2021). He was elected as member of Academia Europeae in 2019 and an a member of EMBO in 2022.

• 2022: Elected Member, European Molecular Biology Organization (EMBO)
• 2021: NWO Vici Grant
• 2019: Elected Member, Academia Europaea
• 2018: ERC Consolidator Grant
• 2012: ERC Starting Grant
• 2009: NWO Vidi Grant
• 2008: Max Planck Institute for Biochemistry Junior Research Award
• 2000: Van Nieuwenhoven Award for Best Undergraduate Student in Biology, University of Nijmegen

• 2024 | Deciphering lineage specification during early embryogenesis in mouse gastruloids using multi-layered proteomics | Suzan Stelloo et al. | Cell Stem Cell | View publication
• 2023 | Quantification of absolute transcription factor binding affinities in the native chromatin context using BANC-seq | Hannah K. Neikes et al. | Nature Biotechnology | View publication
• 2021 | Off-the-shelf proximity biotinylation for interaction proteomics | Irene Santos-Barriopedro et al. | Nature Communications | View publication
• 2021 | Reading ADP-ribosylation using chemical biology and interaction proteomics | Katarzyna W. Kliza et al. | Molecular Cell | View publication
• 2018 | Global profiling of protein-DNA and protein-nucleosome binding affinities using quantitative mass spectrometry | Matthew M. Makowski et al. | Nature Communications | View publication
• 2017 | An interaction landscape of ubiquitin signaling | Xiaofei Zhang et al. | Molecular Cell | View publication
• 2017 | N6-methyladenosine (m6A) recruits and repels proteins to regulate mRNA homeostasis | Raghu R. Edupuganti et al. | Nature Structural & Molecular Biology | View publication
• 2013 | Dynamic readers for 5-(hydroxy)methylcytosine and its oxidized derivatives | Cornelia G. Spruijt et al. | Cell | View publication
• 2010 | Quantitative interaction proteomics and genome-wide profiling of epigenetic histone marks and their readers | Michiel Vermeulen et al. | Cell | View publication
• 2007 | Selective anchoring of TFIID to nucleosomes by trimethylation of histone H3 lysine 4 | Michiel Vermeulen et al. | Cell | View publication